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3YGS

APAF-1 CARD IN COMPLEX WITH PRODOMAIN OF PROCASPASE-9

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Spacegroup nameP 62 2 2
Unit cell lengths92.500, 92.500, 136.800
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution10.000 - 2.500
R-factor0.224

*

Rwork0.224
R-free0.29900
Structure solution methodMIR
RMSD bond length0.009
RMSD bond angle1.447
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareX-PLOR (3.8)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]99.0002.590
High resolution limit [Å]2.5002.500
Rmerge0.0560.177
Total number of observations134080

*

Number of reflections12452

*

Completeness [%]98.693.2
Redundancy11
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.54

*

pH 7.5
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirHEPES100 (mM)
21reservoirpotassium sodium dihydrogen phosphate1.75 (M)
31reservoirdithiothreitol10 (mM)

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PDB entries from 2024-07-24

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