3VRQ
Crystal structure of the tyrosine kinase binding domain of Cbl-c (PL mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 90 |
Detector technology | CCD |
Collection date | 2008-06-18 |
Detector | Bruker DIP-6040 |
Wavelength(s) | 0.900 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.600, 66.211, 81.558 |
Unit cell angles | 90.00, 106.02, 90.00 |
Refinement procedure
Resolution | 37.980 - 2.390 |
R-factor | 0.2176 |
Rwork | 0.215 |
R-free | 0.26380 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.468 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (refmac_5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.490 |
High resolution limit [Å] | 2.390 | 5.170 | 2.400 |
Rmerge | 0.062 | 0.023 | 0.373 |
Number of reflections | 25297 | ||
<I/σ(I)> | 22.777 | 46.682 | 4.006 |
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 3.8 | 3.7 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 288 | 22% PEG3350, 0.1M Magnesium Nitrate, 0.6M NDSB-201, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 288K |