3V9H
Crystal structure of human 1-pyrroline-5-carboxylate dehydrogenase mutant S352A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-16 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979490 |
Spacegroup name | P 65 |
Unit cell lengths | 149.131, 149.131, 190.687 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.451 - 2.400 |
R-factor | 0.2107 |
Rwork | 0.210 |
R-free | 0.25080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3v9g |
RMSD bond length | 0.008 |
RMSD bond angle | 1.157 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.343 | 48.815 | 2.530 |
High resolution limit [Å] | 2.400 | 7.590 | 2.400 |
Rmerge | 0.051 | 0.450 | |
Total number of observations | 11871 | 42899 | |
Number of reflections | 93350 | ||
<I/σ(I)> | 10.7 | 24.9 | 2.3 |
Completeness [%] | 99.7 | 99.2 | 99.5 |
Redundancy | 3.7 | 3.9 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | reservoir: 22.5% PEG3350, 0.2 M ammonium sulfate, 0.1 M HEPES, pH 7.5, cryoprotectant: 25% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K |