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3TL5

Discovery of GDC-0980: a Potent, Selective, and Orally Available Class I Phosphatidylinositol 3-Kinase (PI3K)/Mammalian Target of Rapamycin (mTOR) Kinase Inhibitor for the Treatment of Cancer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2008-10-15
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths140.865, 67.012, 105.812
Unit cell angles90.00, 96.77, 90.00
Refinement procedure
Resolution61.673 - 2.788
R-factor0.2028
Rwork0.199
R-free0.26670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1e8x
RMSD bond length0.013
RMSD bond angle2.195
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.7.1_743)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]105.07420.0003.000
High resolution limit [Å]2.7836.1902.783
Rmerge0.0710.0480.365
Number of reflections24244
<I/σ(I)>13.8
Completeness [%]97.599.583.3
Redundancy3.53.52.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5289PEG3350, 0.2 M ammonium sulfate, 0.1 M Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K

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