Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3SZ2

Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in an open binary complex with dG as templating nucleobase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyCCD
Collection date2011-03-27
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.2300
Spacegroup nameP 31 2 1
Unit cell lengths108.398, 108.398, 89.752
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.938 - 2.150
R-factor0.1921
Rwork0.190
R-free0.23730
Structure solution methodDifference Fourier Techniques
Starting model (for MR)4ktq
RMSD bond length0.003
RMSD bond angle0.758
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.7.1_743))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.9002.280
High resolution limit [Å]2.1502.150
<I/σ(I)>14.77
Completeness [%]100.099.9
Redundancy11.111
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829115% PEG 8000, 0.2M MgFormate, 0.1M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K

237992

PDB entries from 2025-06-25

PDB statisticsPDBj update infoContact PDBjnumon