3SXQ
Structure of a hexameric multiheme c nitrite reductase from the extremophile bacterium Thiolkalivibrio paradoxus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-13 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.800 |
Spacegroup name | P 21 3 |
Unit cell lengths | 193.640, 193.640, 193.640 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.900 - 1.900 |
R-factor | 0.1394 |
Rwork | 0.138 |
R-free | 0.16205 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ot4 |
RMSD bond length | 0.020 |
RMSD bond angle | 1.493 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | REFMAC (5.5.0072) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.900 | 2.000 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.098 | 0.521 |
Number of reflections | 186813 | |
<I/σ(I)> | 9.47 | 2.24 |
Completeness [%] | 98.9 | 99.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | free-interface-diffusion technique | 6.5 | 278 | 14 mg/mL protein, 0.02M cobalt chloride, 0.1M MES (pH 6.5), 2.8 M ammonium sulfate, free-interface-diffusion technique, temperature 278.0K |