3SF6
Crystal structure of Glutaryl-CoA dehydrogenase from Mycobacterium smegmatis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-05-28 |
Detector | ADSC QUANTUM 315 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 130.000, 130.000, 101.930 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.573 - 1.700 |
R-factor | 0.13 |
Rwork | 0.128 |
R-free | 0.15200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2eba |
RMSD bond length | 0.016 |
RMSD bond angle | 1.551 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.573 | 1.740 | |
High resolution limit [Å] | 1.700 | 7.600 | 1.700 |
Rmerge | 0.089 | 0.019 | 0.499 |
Number of reflections | 48008 | 617 | 3470 |
<I/σ(I)> | 30.76 | 101.3 | 6.1 |
Completeness [%] | 100.0 | 99.2 | 100 |
Redundancy | 16.5 | 15.85 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | Internal tracking number 221475C11. JCSG C11. 2 M ammonium sulfate, 0.1 M acetate, pH 4.6, MysmA.01640.c.A1 PS01045 at 45 mg/mL, VAPOR DIFFUSION, SITTING DROP, temperature 290K |