3SDD
Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-beta-lactosylceramide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 213 |
Detector technology | CCD |
Collection date | 2011-03-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.95370 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 94.469, 94.469, 291.063 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 89.850 - 3.000 |
R-factor | 0.261 |
Rwork | 0.258 |
R-free | 0.31800 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.927 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.15) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 89.855 | 89.855 | 3.060 |
High resolution limit [Å] | 2.900 | 9.170 | 2.900 |
Rmerge | 0.111 | 0.040 | 0.818 |
Number of reflections | 30294 | ||
<I/σ(I)> | 13.2 | 13.6 | 1 |
Completeness [%] | 99.9 | 98.9 | 100 |
Redundancy | 6.8 | 6.2 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 16% PEG 6000, 0.1M Sodium citrate, pH 6.0, vapor diffusion, hanging drop, temperature 293K |