3RB6
Dpo4 extension ternary complex with 3'-terminal primer A base opposite the 3-methylcytosine (m3c) lesion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-07-20 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97949 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.915, 109.328, 100.828 |
Unit cell angles | 90.00, 101.07, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.700 |
R-factor | 0.205 |
Rwork | 0.203 |
R-free | 0.24722 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rb4 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.438 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | REFMAC (5.6.0107) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.790 |
High resolution limit [Å] | 2.700 | 2.700 |
Number of reflections | 30903 | |
Completeness [%] | 98.3 | 95.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 100 mM HEPES, pH 7.0, 100 mM calcium acetate and 10% PEG 4000, VAPOR DIFFUSION, HANGING DROP, temperature 293K |