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3QYU

Crystal structure of human cyclophilin D at 1.54 A resolution at room temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM30A
Synchrotron siteESRF
BeamlineBM30A
Temperature [K]298
Detector technologyCCD
Collection date2010-07-25
DetectorADSC QUANTUM 315r
Wavelength(s)0.97964
Spacegroup nameP 41 21 2
Unit cell lengths57.927, 57.927, 88.537
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.530 - 1.540
R-factor0.14974
Rwork0.148
R-free0.18940
Structure solution methodisomorphous
Starting model (for MR)2z6w
RMSD bond length0.010
RMSD bond angle1.230
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.9761.620
High resolution limit [Å]1.5401.540
Rmerge0.299
Number of reflections18518
<I/σ(I)>2.2
Completeness [%]86.282.1
Redundancy3.62.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.329130% Peg 4000, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 291K
1VAPOR DIFFUSION, SITTING DROP7.329130% Peg 4000, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 291K

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