3QUH
Structure of heme transport protein IsdH-NEAT3 from S. aureus in complex with Manganese(III)-porphyrin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-10 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.280, 75.930, 49.330 |
Unit cell angles | 90.00, 95.09, 90.00 |
Refinement procedure
Resolution | 49.140 - 2.700 |
R-factor | 0.22732 |
Rwork | 0.224 |
R-free | 0.28621 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2z6f |
RMSD bond length | 0.011 |
RMSD bond angle | 1.230 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.140 | 36.156 | 2.850 |
High resolution limit [Å] | 2.700 | 8.540 | 2.700 |
Rmerge | 0.082 | 0.404 | |
Rmeas | 0.099 | 0.481 | |
Rpim | 0.054 | 0.258 | |
Total number of observations | 795 | 3864 | |
Number of reflections | 8138 | ||
<I/σ(I)> | 6.6 | 10.3 | 2.8 |
Completeness [%] | 96.7 | 95.6 | 97 |
Redundancy | 3.3 | 3 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | PEG-MME 500 30%, Bicine 0.1M, Sodium Chloride 0.1M, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |