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3P7F

Structure of the human Langerin carbohydrate recognition domain

Replaces:  3BBS
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU300
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2006-03-22
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 42
Unit cell lengths79.760, 79.760, 90.560
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.200 - 2.500
R-factor0.18938
Rwork0.187
R-free0.24288
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3p7g
RMSD bond length0.009
RMSD bond angle1.176
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.600
High resolution limit [Å]2.5002.500
Rmerge0.0910.435
Number of reflections19624
<I/σ(I)>14.93.4
Completeness [%]99.699.9
Redundancy4.24.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.9293Protein: 10mg/ml Langerin in 10 mM Tris/HCl pH 7.5; Reservoir: 0.1 M Na-cacodylate, 13 %(w/v) PEG4000, 0.1 M MgCl2, 5mM CaCl2, VAPOR DIFFUSION, SITTING DROP, temperature 293K

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