3NY6
Catalytic fragment of cholix toxin from vibrio cholerae in complex with inhibitor V30
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-2 |
Synchrotron site | MAX II |
Beamline | I911-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-03-27 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.03796 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.489, 64.973, 86.603 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.310 - 1.680 |
R-factor | 0.176 |
Rwork | 0.174 |
R-free | 0.20000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2q6m |
RMSD bond length | 0.012 |
RMSD bond angle | 1.363 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.720 |
High resolution limit [Å] | 1.680 | 7.510 | 1.680 |
Rmerge | 0.058 | 0.022 | 0.523 |
Number of reflections | 23558 | 312 | 1695 |
<I/σ(I)> | 19.59 | 46 | 3.7 |
Completeness [%] | 99.8 | 95.4 | 99.9 |
Redundancy | 5.6 | 4.6 | 5.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 15% PEG-8000, 0.02 M KH2PO4, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K |