3MRP
Crystal Structure of MHC class I HLA-A2 molecule complexed with Melan-A MART1 decapeptide variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-05-04 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9500 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.473, 80.952, 56.961 |
Unit cell angles | 90.00, 113.15, 90.00 |
Refinement procedure
Resolution | 14.660 - 2.100 |
R-factor | 0.187 |
Rwork | 0.184 |
R-free | 0.22700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mrg |
RMSD bond length | 0.010 |
RMSD bond angle | 1.140 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | AMoRE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.170 | |
High resolution limit [Å] | 2.100 | 8.130 | 2.100 |
Rmerge | 0.068 | 0.031 | 0.236 |
Number of reflections | 25947 | 465 | 2280 |
<I/σ(I)> | 13.68 | 27.7 | 4.7 |
Completeness [%] | 99.1 | 97.3 | 94.1 |
Redundancy | 3.65 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 13% PEG 6000, 0.1M NaCitrate, 0.1M NaCl, 2.61mg/ml protein conc., pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |