3LZC
Crystal structure of Dph2 from Pyrococcus horikoshii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97922 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.008, 82.598, 160.753 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.188 - 2.261 |
R-factor | 0.204 |
Rwork | 0.202 |
R-free | 0.24000 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.035 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MLPHARE |
Refinement software | PHENIX (1.5_2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.290 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.062 | 0.309 |
Number of reflections | 36367 | |
<I/σ(I)> | 8.9 | 2.1 |
Completeness [%] | 97.2 | 81.9 |
Redundancy | 5.8 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.3 | 291 | 8% PEG 4000, 0.1 M ammonium acetate, 0.05 M sodium citrate, 0.2 M KCl, 2% ethylene glycol, pH 5.3, vapor diffusion, hanging drop, temperature 291K |
1 | VAPOR DIFFUSION, HANGING DROP | 5.3 | 291 | 8% PEG 4000, 0.1 M ammonium acetate, 0.05 M sodium citrate, 0.2 M KCl, 2% ethylene glycol, pH 5.3, vapor diffusion, hanging drop, temperature 291K |