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3LPG

Structure of E. coli beta-Glucuronidase bound with a novel, potent inhibitor 3-(2-fluorophenyl)-1-(2-hydroxyethyl)-1-((6-methyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl)urea

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2009-11-15
DetectorMAR CCD 165 mm
Wavelength(s)1.000
Spacegroup nameC 1 2 1
Unit cell lengths167.814, 76.934, 125.810
Unit cell angles90.00, 124.75, 90.00
Refinement procedure
Resolution30.859 - 2.425
R-factor0.206
Rwork0.204
R-free0.24600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3k4d
RMSD bond length0.004
RMSD bond angle1.023
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.8592.477
High resolution limit [Å]2.4252.425
Rmerge0.137
Number of reflections44902
<I/σ(I)>26.64.5
Completeness [%]89.577
Redundancy3.93.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.428915% PEG 3350, 0.2 M MgAcetate, 0.02% sodium azide, 5 mM 3-(2-fluorophenyl)-1-(2-hydroxyethyl)-1-((6-methyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl)urea, pH 7.4, vapor diffusion, hanging drop, temperature 289K

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PDB entries from 2024-07-10

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