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3LPF

Structure of E. coli beta-Glucuronidase bound with a novel, potent inhibitor 1-((6,7-dimethyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl)-1-(2-hydroxyethyl)-3-(3-methoxyphenyl)thiourea

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2009-10-25
DetectorMAR CCD 165 mm
Wavelength(s)1.000
Spacegroup nameC 1 2 1
Unit cell lengths168.058, 77.409, 126.152
Unit cell angles90.00, 124.66, 90.00
Refinement procedure
Resolution50.000 - 2.260
R-factor0.211
Rwork0.209
R-free0.24900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3k4d
RMSD bond length0.011
RMSD bond angle1.594
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0102)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.340
High resolution limit [Å]2.2606.2402.300
Rmerge0.1280.0950.465
Number of reflections59357
<I/σ(I)>13.7
Completeness [%]96.999.578.9
Redundancy6.87.35
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.428915% PEG 3350, 0.2 M MgAcetate, 0.02% sodium azide, 1mM 1-((6,7-dimethyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl)-1-(2-hydroxyethyl)-3-(3-methoxyphenyl)thiourea, pH 7.4, vapor diffusion, hanging drop, temperature 289K

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