3LL5
Crystal structure of T. acidophilum isopentenyl phosphate kinase product complex
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-02-27 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97887 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 187.104, 42.787, 134.895 |
Unit cell angles | 90.00, 113.19, 90.00 |
Refinement procedure
Resolution | 38.292 - 1.987 |
R-factor | 0.1954 |
Rwork | 0.193 |
R-free | 0.23840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | T. acidophilum isopentenyl phosphate kinase solved by single wavelength anomalous diffraction |
RMSD bond length | 0.021 |
RMSD bond angle | 1.975 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.6.1_357) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.060 |
High resolution limit [Å] | 1.990 | 1.990 |
Number of reflections | 65826 | |
<I/σ(I)> | 9.48 | 3.3 |
Redundancy | 1.8 | 1.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 274 | 0.1 M PCB buffer (2:1:2 molar ratio of sodium propionate, sodium cacodylate, Bis-Tris propane, pH 6.0 containing 25% PEG1500, VAPOR DIFFUSION, SITTING DROP, temperature 274K |