3LDL
Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with ATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-03-20 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9730 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.985, 74.326, 90.260 |
Unit cell angles | 90.00, 98.81, 90.00 |
Refinement procedure
Resolution | 15.000 - 2.300 |
R-factor | 0.19776 |
Rwork | 0.194 |
R-free | 0.27852 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fzf |
RMSD bond length | 0.014 |
RMSD bond angle | 1.532 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.110 | 0.427 |
Number of reflections | 30393 | |
<I/σ(I)> | 10 | 2.8 |
Completeness [%] | 92.5 | 87.7 |
Redundancy | 2.5 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1M Tris buffer, 25% Peg3350, 0.1M Na,K tartrate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |