3L2R
Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | AREA DETECTOR |
Collection date | 2009-10-13 |
Detector | ADSC |
Wavelength(s) | 0.9796 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 158.480, 158.480, 124.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.999 - 2.880 |
R-factor | 0.20305 |
Rwork | 0.202 |
R-free | 0.22232 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ENTRIES 3DLR; 1EX4 CHAIN A RESIDUES 223-266; 7bp B-DNA |
RMSD bond length | 0.013 |
RMSD bond angle | 1.657 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.9) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.999 | 3.040 |
High resolution limit [Å] | 2.880 | 2.880 |
Number of reflections | 35972 | |
Completeness [%] | 99.2 | 100 |
Redundancy | 6.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 1.35M ammonium sulfate, 25% (v/v) glycerol, 4.8% (v/v) 1,6-hexanediol, 50mM Mes-NaOH, pH 6.5, vapor diffusion, hanging drop, temperature 291K |