3JQC
Crystal structure of pteridine reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor (NADP+) and inhibitor 2-amino-6-bromo-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile (JU2)
Replaces: 3BMIExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM16 |
Synchrotron site | ESRF |
Beamline | BM16 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-09-20 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.97897 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.862, 89.114, 84.246 |
Unit cell angles | 90.00, 116.08, 90.00 |
Refinement procedure
Resolution | 27.650 - 1.800 |
R-factor | 0.17 |
Rwork | 0.168 |
R-free | 0.20400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2c7v |
RMSD bond length | 0.008 |
RMSD bond angle | 1.424 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.17) |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.650 | 27.650 | 1.900 |
High resolution limit [Å] | 1.800 | 5.690 | 1.800 |
Rmerge | 0.047 | 0.015 | 0.377 |
Total number of observations | 8020 | 23557 | |
Number of reflections | 84262 | ||
<I/σ(I)> | 11.9 | 25.4 | 2 |
Completeness [%] | 92.9 | 99 | 65.2 |
Redundancy | 3 | 2.7 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5 | 293 | 2-3M Sodium acetate, 10-100mM Sodium citrate, pH 5.0, VAPOR DIFFUSION, temperature 293K |