3JQ7
Crystal structure of pteridine reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor (NADP+) and inhibitor 6-phenylpteridine-2,4,7-triamine (DX2)
Replaces: 3BMEExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-09-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.00640 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 74.538, 90.029, 82.359 |
Unit cell angles | 90.00, 115.49, 90.00 |
Refinement procedure
Resolution | 74.330 - 1.800 |
R-factor | 0.154 |
Rwork | 0.152 |
R-free | 0.19100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2c7v |
RMSD bond length | 0.014 |
RMSD bond angle | 1.501 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.2.17) |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 74.340 | 74.340 | 1.900 |
High resolution limit [Å] | 1.800 | 5.690 | 1.800 |
Rmerge | 0.036 | 0.020 | 0.250 |
Total number of observations | 7976 | 38767 | |
Number of reflections | 90613 | ||
<I/σ(I)> | 11.6 | 19.4 | 3 |
Completeness [%] | 99.7 | 95.4 | 100 |
Redundancy | 2.8 | 2.8 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 2-3M Sodium acetate, 10-100mM Sodium citrate, pH 4.0-6.0, VAPOR DIFFUSION, temperature 293K |