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3IMR

Transthyretin in complex with (E)-2,6-dibromo-4-(2,6-dichlorostyryl)phenol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Detector technologyCCD
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.9194
Spacegroup nameP 21 21 2
Unit cell lengths42.927, 85.002, 64.506
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.700
R-factor0.172
Rwork0.169
R-free0.21700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2qgb
RMSD bond length0.019
RMSD bond angle1.818
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]64.5501.760
High resolution limit [Å]1.7001.700
Number of reflections26903
<I/σ(I)>34.67.3
Completeness [%]99.597
Redundancy1411.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5298The WT-TTR was concentrated to 4 mg/mL in 10 mM NaPi, 100 mM KCl, at pH 7.6 and co-crystallized at room temperature using the vapor-diffusion sitting drop method. Crystals were grown from 1.395 M sodium citrate, 3.5% v/v glycerol at pH 5.5. The crystals were frozen using a cryo-protectant solution of 1.395 M sodium citrate, pH 5.5, containing 10% v/v glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 298K

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PDB entries from 2024-05-01

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