3GRU
Crystal Structure of the Complex between AMP and Methanocaldococcus jannaschi Dim1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2008-05-18 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 40.528, 66.276, 62.008 |
| Unit cell angles | 90.00, 107.52, 90.00 |
Refinement procedure
| Resolution | 22.000 - 1.600 |
| R-factor | 0.18414 |
| Rwork | 0.181 |
| R-free | 0.21211 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3fyd chain A |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.139 |
| Data reduction software | d*TREK |
| Data scaling software | d*TREK |
| Phasing software | PHENIX |
| Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 36.850 | 1.660 |
| High resolution limit [Å] | 1.600 | 1.600 |
| Rmerge | 0.035 | 0.293 |
| Number of reflections | 39244 | |
| <I/σ(I)> | 27.2 | 4.6 |
| Completeness [%] | 94.8 | 61.6 |
| Redundancy | 7 | 5.15 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 293 | PEG 8000 (14-16%), 25 MM MES, 50 MM NH2SO4, 7 MM MGCL2, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
