Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3GLC

Crystal Structure of E. coli LsrF in complex with Ribose-5-phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X26C
Synchrotron siteNSLS
BeamlineX26C
Temperature [K]100
Detector technologyCCD
Collection date2008-10-18
DetectorADSC QUANTUM 4
Wavelength(s)1.00
Spacegroup nameP 1
Unit cell lengths78.352, 105.451, 173.415
Unit cell angles89.51, 79.79, 90.34
Refinement procedure
Resolution55.730 - 2.500
R-factor0.206
Rwork0.205
R-free0.23500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3gkf
RMSD bond length0.014
RMSD bond angle1.358
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.6)
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.7302.640
High resolution limit [Å]2.5002.500
Rmerge0.0650.279
Number of reflections154484
<I/σ(I)>7.51.8
Completeness [%]81.767.8
Redundancy2.11.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.52984% PEG 400, 100 mM MgCl2, 2.3 M Ammonium Sulfate, pH 7.5, vapor diffusion, temperature 298K

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon