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3G4I

Crystal structure of human phosphodiesterase 4d with d155871

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Wavelength(s)0.97
Spacegroup nameP 21 21 21
Unit cell lengths98.865, 113.241, 161.220
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.900
R-factor0.183
Rwork0.181
R-free0.21500
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.157
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.970
High resolution limit [Å]1.9001.900
Rmerge0.0570.581
Number of reflections132652
<I/σ(I)>8.9
Completeness [%]92.993.3
Redundancy3.82.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293100MM HEPES PH 7.5, 35% ETHYLENE GLYCOL, 5% GLYCEROL, 22% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K

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