3FZI
1.9 Angstrom structure of the thermophilic exonuclease III homologue Mth0212
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-03-28 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.80150 |
Spacegroup name | P 65 |
Unit cell lengths | 56.040, 56.040, 161.320 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.510 - 1.900 |
R-factor | 0.20081 |
Rwork | 0.198 |
R-free | 0.26161 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1de9 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.563 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
Rmerge | 0.058 | 0.023 | 0.558 |
Number of reflections | 22592 | ||
<I/σ(I)> | 36.32 | ||
Completeness [%] | 99.8 | 98.7 | 100 |
Redundancy | 7.5 | 7.4 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | reservoir: 20 % PEG 1500, 100mM HEPES pH 7.5; protein solution: 600mM NaCl, 20mM HEPES-KOH pH 7.6, 2mM DTT, vapor diffusion, sitting drop, temperature 293K |