3FYC
Crystal Structure of Dim1 from the thermophilic archeon, Methanocaldococcus jannaschi
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-04-23 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 40.384, 72.274, 95.883 |
Unit cell angles | 90.00, 91.87, 90.00 |
Refinement procedure
Resolution | 32.000 - 2.150 |
R-factor | 0.20946 |
Rwork | 0.202 |
R-free | 0.27332 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | composite model consisting of monomers from pdb entries 1QYR 2H1R and 1ZQ9 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.123 |
Data reduction software | CrystalClear |
Data scaling software | CrystalClear |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.770 | 2.230 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.091 | 0.361 |
Number of reflections | 28619 | |
<I/σ(I)> | 12.4 | 4.7 |
Completeness [%] | 94.9 | 91.9 |
Redundancy | 6.62 | 6.65 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 293 | PEG 3350 (18%), 25 mM MES, 50 mM Na2HPO4, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K |