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3EXF

Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2008-02-15
DetectorADSC QUANTUM 315
Wavelength(s)0.98
Spacegroup nameP 1 21 1
Unit cell lengths103.389, 129.668, 144.946
Unit cell angles90.00, 109.15, 90.00
Refinement procedure
Resolution50.000 - 2.998
R-factor0.189
Rwork0.185
R-free0.26300
RMSD bond length0.020
RMSD bond angle2.025
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC (5.4.0069)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.050
High resolution limit [Å]2.9988.1302.998
Rmerge0.1460.0510.560
Number of reflections72201
<I/σ(I)>10.699
Completeness [%]99.899.798.2
Redundancy3.73.73.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529812% PEG 8000, 140mM NaOAC, 50mM BisTris pH6.5, 10% glucose, 50mM Taurine, 8mM MgCl2, and 10mM TCEP, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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