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3EW8

Crystal Structure Analysis of human HDAC8 D101L variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2008-07-10
DetectorADSC QUANTUM 315
Wavelength(s)0.97926
Spacegroup nameP 21 21 2
Unit cell lengths90.557, 88.911, 52.378
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.340 - 1.800
R-factor0.176
Rwork0.176
R-free0.20200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1t67
RMSD bond length0.009
RMSD bond angle1.400
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareCNS (1.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.860
High resolution limit [Å]1.8001.800
Rmerge0.089
Number of reflections39760
<I/σ(I)>203.9
Completeness [%]99.799.5
Redundancy77
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.8298Drop composition: 25 mM Tris, 2.5% glycerol, 75 mM KCl, 1-5% PEG MME 550, 50 mM MES, 1 mM tri(2-carboxyethyl)phosphine (TCEP), 0.03 mM gly-gly-gly, pH 5.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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