3E80
Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | RIGAKU RAXIS HTC |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 201.280, 209.360, 59.220 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.570 - 2.350 |
R-factor | 0.231 |
Rwork | 0.229 |
R-free | 0.26700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fuq |
RMSD bond length | 0.010 |
RMSD bond angle | 1.554 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.570 | 37.570 | 2.430 |
High resolution limit [Å] | 2.350 | 5.060 | 2.350 |
Rmerge | 0.134 | 0.059 | 0.302 |
Total number of observations | 51933 | 35822 | |
Number of reflections | 103320 | ||
<I/σ(I)> | 8.3 | 15.9 | 4.4 |
Completeness [%] | 98.1 | 98.1 | 90 |
Redundancy | 4.62 | 4.72 | 3.81 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 |