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3DDO

X-RAY Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with by Phosphate Ion at 1.5A Resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyCCD
Collection date2004-12-08
DetectorMAR CCD 165 mm
Wavelength(s)1.0500
Spacegroup nameP 21 21 21
Unit cell lengths89.600, 124.920, 134.930
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.908 - 1.500
R-factor0.169
Rwork0.166
R-free0.21200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3c74
RMSD bond length0.007
RMSD bond angle1.094
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine))
Data quality characteristics
 Overall
Low resolution limit [Å]42.100
High resolution limit [Å]1.480
Rmerge0.212
Number of reflections246188
Completeness [%]98.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.229820% PEG 4000, 0.1M potassium phosphate, 0.2M magnesium chloride, 0.1M cacodylate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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