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3C25

Crystal Structure of NotI Restriction Endonuclease Bound to Cognate DNA

Replaces:  3BVR
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Wavelength(s)1.5000
Spacegroup nameP 1 21 1
Unit cell lengths73.890, 81.712, 73.583
Unit cell angles90.00, 99.51, 90.00
Refinement procedure
Resolution50.000 - 2.500
R-factor0.226
Rwork0.223
R-free0.27700
RMSD bond length0.007
RMSD bond angle1.094
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.590
High resolution limit [Å]2.5005.3802.500
Rmerge0.0550.0470.277
Number of reflections29547
<I/σ(I)>14.2
Completeness [%]97.799.482.2
Redundancy6.97.35
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
16.52.0 M Ammonium Sulfate, 100 mM MES, 20 mM NaCl, 10 mM CaCl2, pH 6.5
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111Ammonium Sulfate
211MES
311NaCl
411CaCl2
512Ammonium Sulfate
612MES
712NaCl
812CaCl2

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PDB entries from 2024-05-01

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