3BJU
Crystal Structure of tetrameric form of human lysyl-tRNA synthetase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-10-14 |
Detector | MARMOSAIC 300 mm CCD |
Spacegroup name | P 32 |
Unit cell lengths | 152.013, 152.013, 108.838 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.000 - 2.310 |
R-factor | 0.197 |
Rwork | 0.194 |
R-free | 0.25200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1e24 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.313 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.097 | 0.530 |
Number of reflections | 160180 | |
<I/σ(I)> | 5.7 | 0.87 |
Completeness [%] | 98.0 | 98.2 |
Redundancy | 1.6 | 1.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 5.75 | 277 | 12% PEG8000, 16% Glycerol, 0.08M Na Cacodylate, 0.16M Ca(OAc)2, pH 5.75, VAPOR DIFFUSION, SITTING DROP, temperature 277K |