3AGO
Crystal Structure of Ustilago sphaerogena Ribonuclease U2 complexed with adenosine 3'-monophosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-6A |
Synchrotron site | Photon Factory |
Beamline | BL-6A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2010-01-01 |
Detector | ADSC QUANTUM 4r |
Wavelength(s) | 0.978 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 34.586, 39.425, 31.646 |
Unit cell angles | 90.00, 108.98, 90.00 |
Refinement procedure
Resolution | 32.710 - 0.990 |
R-factor | 0.151 |
Rwork | 0.150 |
R-free | 0.16200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rtu |
RMSD bond length | 0.014 |
RMSD bond angle | 1.900 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.300 | 1.020 |
High resolution limit [Å] | 0.990 | 0.990 |
Rmerge | 0.061 | 0.433 |
Number of reflections | 43053 | |
<I/σ(I)> | 58 | 6.6 |
Completeness [%] | 96.2 | 92.4 |
Redundancy | 9.2 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 3.75 | 293 | 12.5% PEG 8000, 200mM calcium acetate, 100mM sodium cacodylate, 240mM HCl, pH 3.75, VAPOR DIFFUSION, HANGING DROP, temperature 293K |