3A4G
Structure of cytochrome P450 vdh from Pseudonocardia autotrophica (trigonal crystal form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-05-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 31 |
Unit cell lengths | 61.675, 61.675, 98.799 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.440 - 1.750 |
R-factor | 0.18748 |
Rwork | 0.185 |
R-free | 0.23624 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jin |
RMSD bond length | 0.015 |
RMSD bond angle | 1.531 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.810 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.075 | 0.316 |
Number of reflections | 42012 | |
<I/σ(I)> | 21.9 | 3.7 |
Completeness [%] | 99.3 | 93.2 |
Redundancy | 5.3 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 38% PEG400, 0.1M Bis-tris, pH7.5, 50mM CaCl2, 60mM NaCl, VAPOR DIFFUSION, HANGING DROP, temperature 293K |