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3ZF6

Phage dUTPases control transfer of virulence genes by a proto-oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81A D110C S168C mutant with dUpNHpp).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Spacegroup nameP 21 3
Unit cell lengths87.460, 87.460, 87.460
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.710 - 2.600
R-factor0.22758
Rwork0.224
R-free0.27328
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3zez
RMSD bond length0.005
RMSD bond angle0.869
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.1102.740
High resolution limit [Å]2.6002.600
Rmerge0.0500.400
Number of reflections7102
<I/σ(I)>23.23.9
Completeness [%]99.9100
Redundancy5.55.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
12-8% TERT-BUTANOL, 0.1M TRID (PH 8.5). 30-50% MPD OR PEG400.

220113

PDB entries from 2024-05-22

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