3YGS
APAF-1 CARD IN COMPLEX WITH PRODOMAIN OF PROCASPASE-9
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU200 |
| Temperature [K] | 100 |
| Spacegroup name | P 62 2 2 |
| Unit cell lengths | 92.500, 92.500, 136.800 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 10.000 - 2.500 |
| R-factor | 0.224 * |
| Rwork | 0.224 |
| R-free | 0.29900 |
| Structure solution method | MIR |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.447 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Refinement software | X-PLOR (3.8) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 99.000 | 2.590 |
| High resolution limit [Å] | 2.500 | 2.500 |
| Rmerge | 0.056 | 0.177 |
| Total number of observations | 134080 * | |
| Number of reflections | 12452 * | |
| Completeness [%] | 98.6 | 93.2 |
| Redundancy | 11 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion, hanging drop * | 7.5 | 4 * | pH 7.5 |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | HEPES | 100 (mM) | |
| 2 | 1 | reservoir | potassium sodium dihydrogen phosphate | 1.75 (M) | |
| 3 | 1 | reservoir | dithiothreitol | 10 (mM) |






