3WDZ
Crystal Structure of Keap1 in Complex with phosphorylated p62
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-20 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.9 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 75.149, 75.149, 113.008 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.670 - 2.600 |
R-factor | 0.19367 |
Rwork | 0.191 |
R-free | 0.25491 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1x2j |
RMSD bond length | 0.013 |
RMSD bond angle | 1.831 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.640 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.081 | 0.376 |
Number of reflections | 11646 | |
<I/σ(I)> | 14.5 | 6.51 |
Completeness [%] | 99.8 | 98.8 |
Redundancy | 5.2 | 5.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.6 | 297 | 100mM Tris-HCl (pH 8.8), 0.2M Sodium Nitrate, 20% w/v PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 297K |