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3VMA

Crystal Structure of the Full-Length Transglycosylase PBP1b from Escherichia coli

Replaces:  3FWM
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL44XU
Synchrotron siteSPring-8
BeamlineBL44XU
Temperature [K]100
Detector technologyCCD
Collection date2008-07-28
DetectorBruker DIP-6040
Wavelength(s)1.00
Spacegroup nameP 21 21 2
Unit cell lengths62.900, 289.530, 62.780
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.845 - 2.161
R-factor0.2138
Rwork0.212
R-free0.25020
Structure solution methodSAD
Starting model (for MR)3fwl
RMSD bond length0.005
RMSD bond angle0.916
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSOLVE
Refinement softwarePHENIX ((phenix.refine: 1.5_2))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.240
High resolution limit [Å]2.1602.160
Rmerge0.0770.497
Number of reflections60816
<I/σ(I)>2.1
Completeness [%]96.785.8
Redundancy4.54
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP828920mM Tris, 300mM NaCl, 0.28mM n-Dodecyl-N,N-dimethylamine-N-oxide (LDAO), 1.2M sodium formate, 3% 6-Aminohexanoic acid, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 289K

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