3VD8
Crystal structure of human AIM2 PYD domain with MBP fusion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-03-07 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9794 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.599, 91.934, 100.281 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.887 - 2.068 |
R-factor | 0.1841 |
Rwork | 0.182 |
R-free | 0.22120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ob4 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.694 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_947)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.110 |
High resolution limit [Å] | 2.068 | 2.068 |
Rmerge | 0.646 | |
Number of reflections | 35164 | |
<I/σ(I)> | 12.36 | 2.24 |
Completeness [%] | 99.0 | 97 |
Redundancy | 7 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 298 | 20% PEG3350, 0.1M Potassium Acetate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |