3TS9
Crystal Structure of the MDA5 Helicase Insert Domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-22 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0750 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 23.878, 57.618, 90.332 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.546 - 2.003 |
R-factor | 0.1943 |
Rwork | 0.193 |
R-free | 0.22160 |
Structure solution method | MAD |
RMSD bond length | 0.002 |
RMSD bond angle | 0.578 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE (2.13) |
Refinement software | PHENIX (1.7.1_743) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.090 |
High resolution limit [Å] | 2.003 | 4.350 | 2.003 |
Rmerge | 0.122 | 0.070 | |
Number of reflections | 8873 | ||
<I/σ(I)> | 8.1 | ||
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 6.7 | 6.1 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | Crystal #1: 1.9 M ammonium sulfate, 49 mM sodium phosphate, 49 mM glycine, 14 mM succinic acid, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
2 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | Crystal #2: 2.0 M ammonium sulfate, 49 mM sodium phosphate, 49 mM glycine, 14 mM succinic acid, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |