3TKM
Crystal structure PPAR delta binding GW0742
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-06-20 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.4589 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.466, 74.766, 96.287 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.352 - 1.953 |
R-factor | 0.1993 |
Rwork | 0.197 |
R-free | 0.24540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3et2 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.772 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 2009_06_19_0104)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.020 |
High resolution limit [Å] | 1.950 | 4.200 | 1.950 |
Number of reflections | 19254 | 2082 | 1880 |
<I/σ(I)> | 10 | 17.24 | 2.63 |
Completeness [%] | 99.6 | 100 | 100 |
Redundancy | 5.8 | 5.8 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 291 | 14% (w/v) polyethylene glycol (PEG) 8000, 200 mM KCl, 40 mM bis-Tris-propane (pH 9.5), 6% propanol, and 1 mM CaCl2 and detergent n-Octyl-b-D-thioglucoside (0.5 microliters in 5 microliters drops), VAPOR DIFFUSION, SITTING DROP, temperature 291K |