3TDJ
Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM-97 at 1.95 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-5 |
Synchrotron site | MAX II |
Beamline | I911-5 |
Temperature [K] | 99 |
Detector technology | CCD |
Collection date | 2009-09-17 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.908 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 98.860, 121.300, 47.310 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.217 - 1.950 |
R-factor | 0.1721 |
Rwork | 0.170 |
R-free | 0.21540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h6t |
RMSD bond length | 0.007 |
RMSD bond angle | 1.015 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.6.2_432)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 24.260 | 24.260 | 2.060 |
High resolution limit [Å] | 1.950 | 6.170 | 1.950 |
Rmerge | 0.109 | 0.061 | 0.377 |
Number of reflections | 42368 | ||
<I/σ(I)> | 13.2 | 9.3 | 1.9 |
Completeness [%] | 99.9 | 96.8 | 99.9 |
Redundancy | 8 | 7.2 | 8.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 279 | 15.2% PEG4000, 0.3 M lithium sulfate and 0.1 M phosphate-citrate., pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 279K |