Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3QGI

Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-BM
Synchrotron siteAPS
Beamline17-BM
Temperature [K]100
Detector technologyCCD
Collection date2008-03-29
DetectorMAR CCD 165 mm
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths61.400, 84.300, 132.300
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.350 - 1.800
R-factor0.1618
Rwork0.161
R-free0.18880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3XXX NS5B 1A
RMSD bond length0.010
RMSD bond angle1.000
Data reduction softwareHKL-2000 ((DENZO))
Data scaling softwareHKL-2000 ((SCALEPACK))
Phasing softwareAMoRE
Refinement softwareBUSTER-TNT (BUSTER 2.9.4)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.860
High resolution limit [Å]1.8001.800
Rmerge0.0890.460
Number of reflections62602
<I/σ(I)>18.23.5
Completeness [%]97.696.2
Redundancy4.84.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.327725.5% (w/v) PEG 4000, 170 mM (NH4)2SO4, 15% (v/v) glycerol, pH 7.3, vapor diffusion, hanging drop, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon