Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3QEB

Crystal structure of human exonuclease 1 Exo1 (WT) in complex with DNA and Mn2+ (complex III)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2010-07-10
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.00
Spacegroup nameP 43 21 2
Unit cell lengths70.406, 70.406, 182.883
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.030 - 3.000
R-factor0.2258
Rwork0.224
R-free0.26830
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.001
RMSD bond angle0.412
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.6.2_432))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.100
High resolution limit [Å]3.0003.000
Number of reflections11100
Completeness [%]83.353.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6290PEG 6K, MES, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 290K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111PEG 6K
211MES
312PEG 6K
412MES

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon