3NUB
WbpE, an Aminotransferase from Pseudomonas aeruginosa Involved in O-antigen Assembly in Complex with Product as the External Aldimine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2010-02-20 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.978 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 77.924, 148.679, 53.545 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.900 - 1.900 |
R-factor | 0.20159 |
Rwork | 0.199 |
R-free | 0.24298 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nu7 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.284 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.930 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.071 | 0.492 |
Number of reflections | 46379 | |
<I/σ(I)> | 36.3 | 3 |
Completeness [%] | 98.6 | 100 |
Redundancy | 7.3 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | Crystallization conditions: 0.1 M Bis-Tris, pH 5.5, 0.2 M Ammonium sulfate, 25% PEG 3350 in the reservoir; Protein solution contains 25 mM HEPES, pH 8.0, 100 mM NaCl, 0.5% glycerol; Protein incubated with 50 uM PLP and 20 mM UDP-GlcNAc(3NH2)A for 1 hr prior to setting up tray; Drop made by mixing 1.5 uL of protein and reservoir solutions., VAPOR DIFFUSION, HANGING DROP, temperature 298K |