3N85
Crystallographic trimer of HER2 extracellular regions in complex with tryptophan-rich antibody fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2007-07-10 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | .98 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 182.220, 182.220, 330.851 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 3.200 |
R-factor | 0.20689 |
Rwork | 0.206 |
R-free | 0.22989 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1S78 chain A 1FVD chains A B |
RMSD bond length | 0.006 |
RMSD bond angle | 1.096 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 3.200 |
Number of reflections | 52459 |
<I/σ(I)> | 13 |
Completeness [%] | 96.2 |
Redundancy | 8.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 293 | NaCl, Na/K-phosphate, Li-sulfate, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 293 | NaCl, Na/K-phosphate, Li-sulfate, pH 7.3, VAPOR DIFFUSION, SITTING DROP, temperature 293K |