3N7P
Crystal structure of the ectodomain complex of the CGRP receptor, a Class-B GPCR, reveals the site of drug antagonism
Experimental procedure
Experimental method | SAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-09-29 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9804 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 118.000, 118.000, 225.400 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 27.120 - 2.800 |
R-factor | 0.2151 |
Rwork | 0.214 |
R-free | 0.24080 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.060 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | BUSTER-TNT (BUSTER 2.9.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.900 |
High resolution limit [Å] | 2.800 | 6.030 | 2.800 |
Rmerge | 0.065 | 0.037 | 0.319 |
Number of reflections | 39158 | ||
<I/σ(I)> | 17.9 | ||
Completeness [%] | 84.9 | 93.1 | 36 |
Redundancy | 3.3 | 3.5 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, 10mM Tris pH8.5 and 200mM sodium nitrate. The crystals were transfered to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen., VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 1-1.3M ammonium sulfate, 6-8% dioxane, 60-80mM MES pH 6.5, 10mM Tris pH8.5 and 200mM sodium nitrate. The crystals were transfered to 2.1M NaMalonate (pH 7.0) prior to freezing in liquid nitrogen., VAPOR DIFFUSION, HANGING DROP, temperature 298K |