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3K5T

Crystal structure of human diamine oxidase in space group C2221

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2007-01-11
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths94.771, 96.954, 178.060
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution89.090 - 2.110
R-factor0.239
Rwork0.236
R-free0.29000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2c10
RMSD bond length0.009
RMSD bond angle1.224
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.2.25)
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]178.06089.1002.210
High resolution limit [Å]2.1066.6402.100
Rmerge0.1110.1040.299
Total number of observations3137219558
Number of reflections45200
<I/σ(I)>15.75.52.5
Completeness [%]95.210096.2
Redundancy7.4193
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.12980.1 M MES (pH 6.1), 12% w/v PEG 20,000, vapor diffusion, hanging drop, temperature 298K
1VAPOR DIFFUSION, HANGING DROP6.12980.1 M MES (pH 6.1), 12% w/v PEG 20,000, vapor diffusion, hanging drop, temperature 298K

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